STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbxo45F-box/SPRY domain-containing protein 1. (285 aa)    
Predicted Functional Partners:
Skp1a
S-phase kinase-associated protein 1.
    
 0.954
Mycbp2
E3 ubiquitin-protein ligase MYCBP2 isoform X1.
    
 
 0.927
Cul1
Cullin 1.
    
 0.780
MGP_PahariEiJ_P0056682
Elongin-C.
    
 0.711
Cul3
Cullin-3 isoform X1.
    
 0.663
Cul5
Cullin-5 isoform X1.
    
 0.644
Spryd3
SPRY domain-containing protein 3.
    
 
 0.594
Unc13a
Protein unc-13 homolog A.
      
 0.560
Trp73
Tumor protein p73 isoform X1.
    
 
 0.532
Zeb1
Zinc finger E-box-binding homeobox 1 isoform X1.
      
 0.504
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.