STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HgdHomogentisate 1,2-dioxygenase. (445 aa)    
Predicted Functional Partners:
Hpd
4-hydroxyphenylpyruvate dioxygenase.
  
 0.995
Gstz1
Maleylacetoacetate isomerase isoform X1.
 
 
 0.984
Hpdl
4-hydroxyphenylpyruvate dioxygenase-like protein.
  
 0.912
Hps4
Hermansky-Pudlak syndrome 4 protein.
  
 0.898
Fah
Fumarylacetoacetase.
 
 
 0.865
Agxt2
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
   
  
 0.850
Fahd1
Acylpyruvase FAHD1, mitochondrial.
  
 
 0.759
Fahd2a
Fumarylacetoacetate hydrolase domain-containing protein 2A.
  
 
 0.759
Pah
Phenylalanine-4-hydroxylase.
  
  
 0.753
Tph1
Tryptophan 5-hydroxylase 1.
  
  
 0.674
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.