STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Timmdc1Complex I assembly factor TIMMDC1, mitochondrial. (285 aa)    
Predicted Functional Partners:
Ndufaf4
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4.
   
 0.994
Ndufaf3
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 isoform X1.
    
 0.987
Ndufa8
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8.
   
 0.981
Ndufa13
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13.
    
 0.977
Tmem126b
Complex I assembly factor TMEM126B, mitochondrial.
    
 0.976
Ecsit
Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial.
    
 0.972
Ndufs2
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial isoform X1.
    
 0.968
Ndufb10
NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10.
    
 0.966
Ndufs8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
    
 0.965
Ndufb9
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 isoform X1.
    
 0.965
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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