STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cryzl1Quinone oxidoreductase-like protein 1 isoform X1. (348 aa)    
Predicted Functional Partners:
Ppp1r21
Protein phosphatase 1 regulatory subunit 21 isoform X1.
    
   0.707
Urb1
Nucleolar pre-ribosomal-associated protein 1 isoform X1.
      
 0.636
Donson
Protein downstream neighbor of Son.
 
    
 0.591
Fasn
Fatty acid synthase, animal type.
  
0.577
MGP_PahariEiJ_P0029857
annotation not available
      
 0.569
Tmem50b
Transmembrane protein 50B.
      
 0.556
Hsdl2
Hydroxysteroid dehydrogenase-like protein 2 isoform X1.
  
 0.542
Gatd1
Parkinson disease 7 domain-containing protein 1 isoform X1.
   
  0.534
Psmg1
Proteasome assembly chaperone 1 isoform X1.
      
 0.504
Cfap298
UPF0769 protein C21orf59 homolog isoform X1.
      
 0.497
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.