Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fam53a | MGP_PahariEiJ_P0030772 | MGP_PahariEiJ_P0030754 | MGP_PahariEiJ_P0030772 | Protein FAM53A isoform X1. | annotation not available | 0.418 |
Fam53a | Slc44a2 | MGP_PahariEiJ_P0030754 | MGP_PahariEiJ_P0022599 | Protein FAM53A isoform X1. | Solute carrier family 44 (choline transporter-like protein), member 2/4/5. | 0.478 |
Fam53a | Tmem129 | MGP_PahariEiJ_P0030754 | MGP_PahariEiJ_P0030768 | Protein FAM53A isoform X1. | E3 ubiquitin-protein ligase TM129 isoform X1. | 0.512 |
Fam53a | Tmem241 | MGP_PahariEiJ_P0030754 | MGP_PahariEiJ_P0038662 | Protein FAM53A isoform X1. | Transmembrane protein 241 isoform X1. | 0.663 |
MGP_PahariEiJ_P0030772 | Fam53a | MGP_PahariEiJ_P0030772 | MGP_PahariEiJ_P0030754 | annotation not available | Protein FAM53A isoform X1. | 0.418 |
Slc44a2 | Fam53a | MGP_PahariEiJ_P0022599 | MGP_PahariEiJ_P0030754 | Solute carrier family 44 (choline transporter-like protein), member 2/4/5. | Protein FAM53A isoform X1. | 0.478 |
Slc44a2 | Tmem241 | MGP_PahariEiJ_P0022599 | MGP_PahariEiJ_P0038662 | Solute carrier family 44 (choline transporter-like protein), member 2/4/5. | Transmembrane protein 241 isoform X1. | 0.420 |
Tmem129 | Fam53a | MGP_PahariEiJ_P0030768 | MGP_PahariEiJ_P0030754 | E3 ubiquitin-protein ligase TM129 isoform X1. | Protein FAM53A isoform X1. | 0.512 |
Tmem241 | Fam53a | MGP_PahariEiJ_P0038662 | MGP_PahariEiJ_P0030754 | Transmembrane protein 241 isoform X1. | Protein FAM53A isoform X1. | 0.663 |
Tmem241 | Slc44a2 | MGP_PahariEiJ_P0038662 | MGP_PahariEiJ_P0022599 | Transmembrane protein 241 isoform X1. | Solute carrier family 44 (choline transporter-like protein), member 2/4/5. | 0.420 |