STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NelfaNegative elongation factor A. (530 aa)    
Predicted Functional Partners:
Nelfe
Negative elongation factor E.
   
 0.998
Nelfcd
Negative elongation factor C/D.
    
 0.998
Nelfb
Negative elongation factor B.
   
 0.993
Polr2a
DNA-directed RNA polymerase II subunit RPB1.
   
  0.982
Supt5
Transcription elongation factor SPT5 isoform X1.
   
 0.962
Polr2f
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.879
Polr2c
DNA-directed RNA polymerase II subunit RPB3.
    
 0.876
Polr2i
DNA-directed RNA polymerase II subunit RPB9.
    
  0.874
Polr2b
DNA-directed RNA polymerase II subunit RPB2 isoform X1.
    
  0.874
Polr2k
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.874
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.