STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmprss11bTransmembrane protease serine 11B-like protein. (415 aa)    
Predicted Functional Partners:
Krt77
Keratin, type II cytoskeletal 1b.
   
 0.518
Mst1r
Macrophage-stimulating protein receptor isoform X1.
    
 0.492
Met
Proto-oncogene tyrosine-protein kinase Met.
    
 0.492
Lce1m
Late cornified envelope protein 1A-like.
      
 0.463
Fam57b
Protein FAM57B isoform X1.
      
 0.461
Hs3st6
Heparan sulfate glucosamine 3-O-sulfotransferase 6 isoform X1.
      
 0.420
Shfl
Repressor of yield of DENV protein isoform X1.
    
 0.418
Crnn
Cornulin.
   
 0.418
Ctrl
Chymotrypsin-like protease CTRL-1.
  
0.413
Krtap11-1
Keratin-associated protein 11-1 isoform X1.
      
 0.400
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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