Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Clk1 | Clk4 | MGP_PahariEiJ_P0073083 | MGP_PahariEiJ_P0033278 | Dual specificity protein kinase CLK1 isoform X1. | Dual specificity protein kinase CLK4 isoform X1. | 0.948 |
Clk1 | Iqub | MGP_PahariEiJ_P0073083 | MGP_PahariEiJ_P0048938 | Dual specificity protein kinase CLK1 isoform X1. | IQ and ubiquitin-like domain-containing protein. | 0.507 |
Clk1 | Rabggtb | MGP_PahariEiJ_P0073083 | MGP_PahariEiJ_P0072060 | Dual specificity protein kinase CLK1 isoform X1. | Geranylgeranyl transferase type-2 subunit beta. | 0.455 |
Clk1 | Srsf1 | MGP_PahariEiJ_P0073083 | MGP_PahariEiJ_P0035825 | Dual specificity protein kinase CLK1 isoform X1. | Serine/arginine-rich splicing factor 1 isoform X1. | 0.673 |
Clk1 | Tra2a | MGP_PahariEiJ_P0073083 | MGP_PahariEiJ_P0049850 | Dual specificity protein kinase CLK1 isoform X1. | Transformer-2 protein homolog alpha isoform X1. | 0.418 |
Clk4 | Clk1 | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0073083 | Dual specificity protein kinase CLK4 isoform X1. | Dual specificity protein kinase CLK1 isoform X1. | 0.948 |
Clk4 | Cmtm7 | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0026141 | Dual specificity protein kinase CLK4 isoform X1. | CKLF-like MARVEL transmembrane domain-containing protein 7. | 0.549 |
Clk4 | Iqub | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0048938 | Dual specificity protein kinase CLK4 isoform X1. | IQ and ubiquitin-like domain-containing protein. | 0.466 |
Clk4 | Irx1 | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0026507 | Dual specificity protein kinase CLK4 isoform X1. | Iroquois-class homeodomain protein IRX-1. | 0.416 |
Clk4 | Rabggtb | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0072060 | Dual specificity protein kinase CLK4 isoform X1. | Geranylgeranyl transferase type-2 subunit beta. | 0.455 |
Clk4 | Sptbn4 | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0015133 | Dual specificity protein kinase CLK4 isoform X1. | Spectrin beta chain, non-erythrocytic 4 isoform X1. | 0.406 |
Clk4 | Srsf1 | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0035825 | Dual specificity protein kinase CLK4 isoform X1. | Serine/arginine-rich splicing factor 1 isoform X1. | 0.563 |
Clk4 | Srsf6 | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0066909 | Dual specificity protein kinase CLK4 isoform X1. | Splicing factor, arginine/serine-rich 4/5/6. | 0.453 |
Clk4 | Tra2a | MGP_PahariEiJ_P0033278 | MGP_PahariEiJ_P0049850 | Dual specificity protein kinase CLK4 isoform X1. | Transformer-2 protein homolog alpha isoform X1. | 0.439 |
Cmtm7 | Clk4 | MGP_PahariEiJ_P0026141 | MGP_PahariEiJ_P0033278 | CKLF-like MARVEL transmembrane domain-containing protein 7. | Dual specificity protein kinase CLK4 isoform X1. | 0.549 |
Cmtm7 | Sptbn4 | MGP_PahariEiJ_P0026141 | MGP_PahariEiJ_P0015133 | CKLF-like MARVEL transmembrane domain-containing protein 7. | Spectrin beta chain, non-erythrocytic 4 isoform X1. | 0.732 |
Iqub | Clk1 | MGP_PahariEiJ_P0048938 | MGP_PahariEiJ_P0073083 | IQ and ubiquitin-like domain-containing protein. | Dual specificity protein kinase CLK1 isoform X1. | 0.507 |
Iqub | Clk4 | MGP_PahariEiJ_P0048938 | MGP_PahariEiJ_P0033278 | IQ and ubiquitin-like domain-containing protein. | Dual specificity protein kinase CLK4 isoform X1. | 0.466 |
Irx1 | Clk4 | MGP_PahariEiJ_P0026507 | MGP_PahariEiJ_P0033278 | Iroquois-class homeodomain protein IRX-1. | Dual specificity protein kinase CLK4 isoform X1. | 0.416 |
Rabggtb | Clk1 | MGP_PahariEiJ_P0072060 | MGP_PahariEiJ_P0073083 | Geranylgeranyl transferase type-2 subunit beta. | Dual specificity protein kinase CLK1 isoform X1. | 0.455 |
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