STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clk4Dual specificity protein kinase CLK4 isoform X1. (481 aa)    
Predicted Functional Partners:
Clk1
Dual specificity protein kinase CLK1 isoform X1.
  
 
 
0.948
Srsf1
Serine/arginine-rich splicing factor 1 isoform X1.
   
 
 0.563
Cmtm7
CKLF-like MARVEL transmembrane domain-containing protein 7.
      
 0.549
Iqub
IQ and ubiquitin-like domain-containing protein.
   
  
 0.466
Rabggtb
Geranylgeranyl transferase type-2 subunit beta.
   
    0.455
Srsf6
Splicing factor, arginine/serine-rich 4/5/6.
   
 
 0.453
Tra2a
Transformer-2 protein homolog alpha isoform X1.
   
 
 0.439
Irx1
Iroquois-class homeodomain protein IRX-1.
   
  
 0.416
Sptbn4
Spectrin beta chain, non-erythrocytic 4 isoform X1.
   
  
 0.406
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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