STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_PahariEiJ_P0033441annotation not available (472 aa)    
Predicted Functional Partners:
Slc15a2
Solute carrier family 15 (oligopeptide transporter), member 2.
   
  
 0.609
Slc15a1
Solute carrier family 15 (oligopeptide transporter), member 1.
   
  
 0.591
Slc25a20
Solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29.
   
  
 0.589
Slco4c1
Solute carrier organic anion transporter family member 4C1.
   
  
 0.574
Slco2b1
Solute carrier organic anion transporter family member 2B1 isoform X1.
   
  
 0.571
Slc47a1
Multidrug resistance protein, MATE family.
   
  
 0.570
Bbox1
Gamma-butyrobetaine dioxygenase.
      
 0.558
Slc29a1
Solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3.
    
 
 0.505
Abcc2
ATP-binding cassette, subfamily C (CFTR/MRP), member 2.
   
 
 0.497
Slco4a1
Solute carrier organic anion transporter family member 4A1.
   
  
 0.486
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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