STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Top3aDNA topoisomerase 3-alpha isoform X1. (1003 aa)    
Predicted Functional Partners:
Blm
Bloom syndrome protein.
  
 0.999
Rmi1
RecQ-mediated genome instability protein 1.
    
 0.999
Fancm
Fanconi anemia group M protein.
   
 0.999
Wrn
Werner syndrome ATP-dependent helicase.
  
 0.998
Rpa1
Replication protein A 70 kDa DNA-binding subunit.
   
 0.996
Rpa3
Replication protein A 14 kDa subunit.
    
 0.995
Rpa2
Replication protein A 32 kDa subunit.
    
 0.984
Fancg
Fanconi anemia group G protein isoform X1.
   
 
 0.937
Fanca
Fanconi anemia group A protein.
    
 
 0.933
Brca2
Breast cancer type 2 susceptibility protein.
    
 0.923
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.