STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Odf4Outer dense fiber protein 4. (289 aa)    
Predicted Functional Partners:
Odf3
Outer dense fiber protein 3 isoform X1.
      
 0.606
Odf1
Outer dense fiber of sperm tails 1.
   
  
 0.578
Ccdc181
Coiled-coil domain-containing protein 181.
      
 0.558
Tex38
Testis-expressed protein 38.
      
 0.558
Actl7b
Actin-like protein 7B.
   
 
 0.536
Meig1
Meiosis expressed gene 1 protein homolog.
      
 0.505
Ccdc42
Coiled-coil domain-containing protein 42 isoform X1.
      
 0.495
Ccdc63
Coiled-coil domain-containing protein 63 isoform X1.
      
 0.485
Vwa7
Von Willebrand factor A domain-containing protein 7 isoform X1.
      
 0.478
Arrdc5
Arrestin domain-containing protein 5.
      
 0.478
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.