STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cxcl16C-X-C motif chemokine 16. (246 aa)    
Predicted Functional Partners:
Cxcr6
C-X-C chemokine receptor type 6 isoform X1.
     
 0.999
Ccr6
C-C chemokine receptor type 6 isoform X1.
     
 0.950
Cxcr3
C-X-C chemokine receptor type 3.
     
 0.932
Cxcr4
C-X-C chemokine receptor type 4.
     
 0.930
Ccr5
C-C chemokine receptor type 5.
     
 0.927
Cxcr2
C-X-C chemokine receptor type 2.
     
 0.908
Cxcr1
C-X-C chemokine receptor type 1.
     
 0.907
Ccr2
C-C chemokine receptor type 2.
     
 0.906
Ccr7
C-C chemokine receptor type 7 isoform X1.
     
 0.897
Cxcr5
C-X-C chemokine receptor type 5.
     
 0.891
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.