STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dph12-(3-amino-3-carboxypropyl)histidine synthase subunit 1. (438 aa)    
Predicted Functional Partners:
Dph2
2-(3-amino-3-carboxypropyl)histidine synthase subunit 2.
   
0.994
Dph3
Diphthamide biosynthesis protein 3.
   
 0.987
Eef2
Elongation factor 2.
    
 0.881
Dph5
Diphthine methyl ester synthase.
   
 0.844
Efl1
Elongation factor-like GTPase 1 isoform X1.
    
 0.760
Eftud2
116 kDa U5 small nuclear ribonucleoprotein component isoform X1.
    
 0.760
Gfm1
Elongation factor G, mitochondrial isoform X1.
    
 0.760
Dnajc24
Diphthamide biosynthesis protein 4.
   
 
 0.711
Dph7
Diphthine methyl ester acylhydrolase.
      
 0.670
Usp48
Ubiquitin carboxyl-terminal hydrolase 48 isoform X1.
   
  
 0.652
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.