STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpa1Replication protein A 70 kDa DNA-binding subunit. (620 aa)    
Predicted Functional Partners:
Rpa3
Replication protein A 14 kDa subunit.
   
 0.999
Rpa2
Replication protein A 32 kDa subunit.
   
 0.998
Blm
Bloom syndrome protein.
   
 0.997
Wrn
Werner syndrome ATP-dependent helicase.
   
 0.997
Top3a
DNA topoisomerase 3-alpha isoform X1.
   
 0.996
Rmi1
RecQ-mediated genome instability protein 1.
    
 0.996
Fancm
Fanconi anemia group M protein.
    
 0.995
Top3b
DNA topoisomerase 3-beta-1.
   
 0.970
Primpol
DNA-directed primase/polymerase protein.
   
 
 0.970
Dna2
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 0.969
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.