STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PipoxSarcosine oxidase / L-pipecolate oxidase. (390 aa)    
Predicted Functional Partners:
Sardh
Sarcosine dehydrogenase, mitochondrial.
  
 0.976
Dmgdh
Dimethylglycine dehydrogenase, mitochondrial.
  
 0.966
Gldc
Glycine dehydrogenase (decarboxylating), mitochondrial.
   
 
 0.960
Agxt
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
 0.958
Dao
D-amino-acid oxidase isoform X1.
   
 
 0.953
Shmt2
Serine hydroxymethyltransferase, mitochondrial isoform X1.
  
 
 0.950
Agxt2
Alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase.
  
 
 0.943
Tha1
Probable low-specificity L-threonine aldolase 2.
    
 0.940
Gnmt
Glycine N-methyltransferase isoform X1.
   
 
 0.931
Gcat
2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial isoform X1.
  
 
 0.929
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.