STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taf15Transcription initiation factor TFIID subunit 15. (567 aa)    
Predicted Functional Partners:
Taf13
Transcription initiation factor TFIID subunit 13.
   
 0.923
Tbp
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.910
Taf4b
Transcription initiation factor TFIID subunit 4B isoform X1.
   
  0.897
Taf5
Transcription initiation factor TFIID subunit 5 isoform X1.
    
  0.896
Taf12
Transcription initiation factor TFIID subunit 12 isoform X1.
   
  0.895
Taf11
Transcription initiation factor TFIID subunit 11 isoform X1.
    
  0.887
Taf2
LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2.
     
 0.885
Taf9b
Transcription initiation factor TFIID subunit 9B.
    
  0.881
Tardbp
TAR DNA-binding protein 43 isoform X1.
   
 0.830
Taf3
Transcription initiation factor TFIID subunit 3.
     
 0.790
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.