STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Car10Carbonic anhydrase-related protein 10. (328 aa)    
Predicted Functional Partners:
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.562
Bmp2
Bone morphogenetic protein 2.
   
  
 0.505
Rem2
Rad and Gem related GTP binding protein 2.
   
  
 0.493
Utp18
U3 small nucleolar RNA-associated protein 18 homolog isoform X1.
   
  
 0.491
Rpl5
Large subunit ribosomal protein L5e.
    
 
 0.476
Rem1
Rad and Gem related GTP binding protein 1.
   
  
 0.469
Rrs1
Ribosome biogenesis regulatory protein homolog.
   
 
 0.450
Grwd1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.446
Ppan
Ribosome biogenesis protein SSF1/2.
   
    0.443
Prss48
Serine protease 48.
    
 
 0.426
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.