Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Abi1 | Abi3 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0036097 | Abl interactor 1 isoform X1. | ABI gene family member 3 isoform X1. | 0.777 |
Abi1 | Brk1 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0051667 | Abl interactor 1 isoform X1. | Chromosome 3 open reading frame 10. | 0.997 |
Abi1 | Cyfip1 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0016694 | Abl interactor 1 isoform X1. | Cytoplasmic FMR1-interacting protein 1. | 0.998 |
Abi1 | Cyfip2 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0033056 | Abl interactor 1 isoform X1. | Cytoplasmic FMR1-interacting protein 2. | 0.997 |
Abi1 | Gm732 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0090127 | Abl interactor 1 isoform X1. | Uncharacterized protein LOC110314256. | 0.875 |
Abi1 | Nckap1 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0063528 | Abl interactor 1 isoform X1. | Nck-associated protein 1 isoform X1. | 0.998 |
Abi1 | Nckap1l | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0043442 | Abl interactor 1 isoform X1. | Nck-associated protein 1-like. | 0.998 |
Abi1 | Wasf1 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0085888 | Abl interactor 1 isoform X1. | Wiskott-Aldrich syndrome protein family member 1. | 0.990 |
Abi1 | Wasf2 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0080002 | Abl interactor 1 isoform X1. | Wiskott-Aldrich syndrome protein family member 2. | 0.992 |
Abi1 | Wasf3 | MGP_PahariEiJ_P0060901 | MGP_PahariEiJ_P0060400 | Abl interactor 1 isoform X1. | Wiskott-Aldrich syndrome protein family member 3 isoform X1. | 0.986 |
Abi3 | Abi1 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0060901 | ABI gene family member 3 isoform X1. | Abl interactor 1 isoform X1. | 0.777 |
Abi3 | Brk1 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0051667 | ABI gene family member 3 isoform X1. | Chromosome 3 open reading frame 10. | 0.929 |
Abi3 | Cyfip1 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0016694 | ABI gene family member 3 isoform X1. | Cytoplasmic FMR1-interacting protein 1. | 0.968 |
Abi3 | Cyfip2 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0033056 | ABI gene family member 3 isoform X1. | Cytoplasmic FMR1-interacting protein 2. | 0.946 |
Abi3 | Gm732 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0090127 | ABI gene family member 3 isoform X1. | Uncharacterized protein LOC110314256. | 0.790 |
Abi3 | Nckap1 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0063528 | ABI gene family member 3 isoform X1. | Nck-associated protein 1 isoform X1. | 0.969 |
Abi3 | Nckap1l | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0043442 | ABI gene family member 3 isoform X1. | Nck-associated protein 1-like. | 0.968 |
Abi3 | Wasf1 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0085888 | ABI gene family member 3 isoform X1. | Wiskott-Aldrich syndrome protein family member 1. | 0.951 |
Abi3 | Wasf2 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0080002 | ABI gene family member 3 isoform X1. | Wiskott-Aldrich syndrome protein family member 2. | 0.951 |
Abi3 | Wasf3 | MGP_PahariEiJ_P0036097 | MGP_PahariEiJ_P0060400 | ABI gene family member 3 isoform X1. | Wiskott-Aldrich syndrome protein family member 3 isoform X1. | 0.882 |
page 1 of 6