Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cav3 | Dag1 | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0025582 | Caveolin 3. | Dystroglycan 1. | 0.918 |
Cav3 | Dmd | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0089682 | Caveolin 3. | Dystrophin isoform X1. | 0.942 |
Cav3 | Krt19 | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0036550 | Caveolin 3. | Keratin, type I cytoskeletal 19 isoform X1. | 0.775 |
Cav3 | Krt8 | MGP_PahariEiJ_P0051511 | MGP_PahariEiJ_P0043288 | Caveolin 3. | Keratin, type II cytoskeletal 8. | 0.771 |
Dag1 | Cav3 | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0051511 | Dystroglycan 1. | Caveolin 3. | 0.918 |
Dag1 | Dmd | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0089682 | Dystroglycan 1. | Dystrophin isoform X1. | 0.999 |
Dag1 | Gp1ba | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0034626 | Dystroglycan 1. | Platelet glycoprotein Ib alpha chain. | 0.788 |
Dag1 | Gp5 | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0028564 | Dystroglycan 1. | Platelet glycoprotein V. | 0.763 |
Dag1 | Krt19 | MGP_PahariEiJ_P0025582 | MGP_PahariEiJ_P0036550 | Dystroglycan 1. | Keratin, type I cytoskeletal 19 isoform X1. | 0.847 |
Dmd | Cav3 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0051511 | Dystrophin isoform X1. | Caveolin 3. | 0.942 |
Dmd | Dag1 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0025582 | Dystrophin isoform X1. | Dystroglycan 1. | 0.999 |
Dmd | Gp1ba | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0034626 | Dystrophin isoform X1. | Platelet glycoprotein Ib alpha chain. | 0.765 |
Dmd | Gp1bb | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0028221 | Dystrophin isoform X1. | Platelet glycoprotein Ib beta chain. | 0.765 |
Dmd | Gp5 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0028564 | Dystrophin isoform X1. | Platelet glycoprotein V. | 0.768 |
Dmd | Gp9 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0050977 | Dystrophin isoform X1. | Platelet glycoprotein IX. | 0.765 |
Dmd | Krt19 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0036550 | Dystrophin isoform X1. | Keratin, type I cytoskeletal 19 isoform X1. | 0.867 |
Dmd | Krt8 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0043288 | Dystrophin isoform X1. | Keratin, type II cytoskeletal 8. | 0.864 |
Dmd | Pgm5 | MGP_PahariEiJ_P0089682 | MGP_PahariEiJ_P0021387 | Dystrophin isoform X1. | Phosphoglucomutase-like protein 5. | 0.894 |
Epcam | Krt19 | MGP_PahariEiJ_P0045329 | MGP_PahariEiJ_P0036550 | Epithelial cell adhesion molecule. | Keratin, type I cytoskeletal 19 isoform X1. | 0.728 |
Epcam | Krt8 | MGP_PahariEiJ_P0045329 | MGP_PahariEiJ_P0043288 | Epithelial cell adhesion molecule. | Keratin, type II cytoskeletal 8. | 0.656 |
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