STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hdac5Histone deacetylase 5 isoform X1. (1122 aa)    
Predicted Functional Partners:
Hdac4
Histone deacetylase 4 isoform X1.
  
 
0.975
Ncor2
Nuclear receptor corepressor 2 isoform X1.
   
 0.935
Camk4
Calcium/calmodulin-dependent protein kinase type IV.
   
 0.913
Ncor1
Nuclear receptor co-repressor 1.
    
 0.903
Ankra2
Ankyrin repeat family A protein 2 isoform X1.
    
 0.863
Hdac2
Histone deacetylase 1/2.
  
 
0.852
Mef2c
Myocyte-specific enhancer factor 2C isoform X1.
   
 
 0.832
Arid4b
AT-rich interactive domain-containing protein 4B isoform X1.
    
 0.825
Arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.825
Runx2
Runt-related transcription factor 2 isoform X1.
   
 0.824
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.