Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cyb561 | Dbh | MGP_PahariEiJ_P0037219 | MGP_PahariEiJ_P0061518 | Cytochrome b-561. | Dopamine beta-monooxygenase. | 0.420 |
Cyb561 | Frrs1 | MGP_PahariEiJ_P0037219 | MGP_PahariEiJ_P0071114 | Cytochrome b-561. | Ferric-chelate reductase 1. | 0.447 |
Cyb561 | Pam | MGP_PahariEiJ_P0037219 | MGP_PahariEiJ_P0074618 | Cytochrome b-561. | Peptidylglycine monooxygenase / peptidylamidoglycolate lyase. | 0.457 |
Cyb561 | Steap2 | MGP_PahariEiJ_P0037219 | MGP_PahariEiJ_P0048040 | Cytochrome b-561. | Metalloreductase STEAP2. | 0.406 |
Cyb561 | Steap3 | MGP_PahariEiJ_P0037219 | MGP_PahariEiJ_P0074815 | Cytochrome b-561. | Metalloreductase STEAP3. | 0.418 |
Dbh | Cyb561 | MGP_PahariEiJ_P0061518 | MGP_PahariEiJ_P0037219 | Dopamine beta-monooxygenase. | Cytochrome b-561. | 0.420 |
Frrs1 | Cyb561 | MGP_PahariEiJ_P0071114 | MGP_PahariEiJ_P0037219 | Ferric-chelate reductase 1. | Cytochrome b-561. | 0.447 |
Pam | Cyb561 | MGP_PahariEiJ_P0074618 | MGP_PahariEiJ_P0037219 | Peptidylglycine monooxygenase / peptidylamidoglycolate lyase. | Cytochrome b-561. | 0.457 |
Steap2 | Cyb561 | MGP_PahariEiJ_P0048040 | MGP_PahariEiJ_P0037219 | Metalloreductase STEAP2. | Cytochrome b-561. | 0.406 |
Steap3 | Cyb561 | MGP_PahariEiJ_P0074815 | MGP_PahariEiJ_P0037219 | Metalloreductase STEAP3. | Cytochrome b-561. | 0.418 |