STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cacng1Voltage-dependent calcium channel gamma-1 subunit. (223 aa)    
Predicted Functional Partners:
Cacna1s
Voltage-dependent L-type calcium channel subunit alpha-1S.
   
 0.977
Cacnb1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 0.972
Cacna2d1
Voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1.
    
 0.964
Cacna2d2
Voltage-dependent calcium channel subunit alpha-2/delta-2 isoform X1.
    
 0.961
Cacna1d
Voltage-dependent L-type calcium channel subunit alpha-1D isoform X1.
   
 0.958
Cacna1c
Voltage-dependent L-type calcium channel subunit alpha-1C isoform X1.
   
 0.933
Cacnb4
Voltage-dependent L-type calcium channel subunit beta-4 isoform X1.
   
 0.927
Cacna1f
Voltage-dependent L-type calcium channel subunit alpha-1F isoform X1.
   
 0.922
Cacng4
Voltage-dependent calcium channel gamma-4 subunit.
     
 0.913
Cacnb3
Voltage-dependent L-type calcium channel subunit beta-3 isoform X1.
   
 0.911
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.