Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aldh18a1 | Cyb5r4 | MGP_PahariEiJ_P0021700 | MGP_PahariEiJ_P0024622 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | Cytochrome b5 reductase 4 isoform X1. | 0.539 |
Aldh18a1 | Fdxr | MGP_PahariEiJ_P0021700 | MGP_PahariEiJ_P0037597 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1. | 0.789 |
Aldh18a1 | Glud1 | MGP_PahariEiJ_P0021700 | MGP_PahariEiJ_P0084326 | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | Glutamate dehydrogenase 1, mitochondrial. | 0.982 |
Cyb5r4 | Aldh18a1 | MGP_PahariEiJ_P0024622 | MGP_PahariEiJ_P0021700 | Cytochrome b5 reductase 4 isoform X1. | Delta-1-pyrroline-5-carboxylate synthase isoform X1. | 0.539 |
Cyb5r4 | Dhodh | MGP_PahariEiJ_P0024622 | MGP_PahariEiJ_P0054224 | Cytochrome b5 reductase 4 isoform X1. | Dihydroorotate dehydrogenase (quinone), mitochondrial. | 0.899 |
Cyb5r4 | Dpyd | MGP_PahariEiJ_P0024622 | MGP_PahariEiJ_P0071129 | Cytochrome b5 reductase 4 isoform X1. | Dihydropyrimidine dehydrogenase [NADP(+)]. | 0.889 |
Cyb5r4 | Fdx1 | MGP_PahariEiJ_P0024622 | MGP_PahariEiJ_P0023505 | Cytochrome b5 reductase 4 isoform X1. | Ferredoxin-1, mitochondrial. | 0.640 |
Cyb5r4 | Fdx2 | MGP_PahariEiJ_P0024622 | MGP_PahariEiJ_P0022570 | Cytochrome b5 reductase 4 isoform X1. | Ferredoxin 2. | 0.640 |
Cyb5r4 | Fdxr | MGP_PahariEiJ_P0024622 | MGP_PahariEiJ_P0037597 | Cytochrome b5 reductase 4 isoform X1. | NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1. | 0.742 |
Cyb5r4 | Glud1 | MGP_PahariEiJ_P0024622 | MGP_PahariEiJ_P0084326 | Cytochrome b5 reductase 4 isoform X1. | Glutamate dehydrogenase 1, mitochondrial. | 0.544 |
Dhodh | Cyb5r4 | MGP_PahariEiJ_P0054224 | MGP_PahariEiJ_P0024622 | Dihydroorotate dehydrogenase (quinone), mitochondrial. | Cytochrome b5 reductase 4 isoform X1. | 0.899 |
Dhodh | Dpyd | MGP_PahariEiJ_P0054224 | MGP_PahariEiJ_P0071129 | Dihydroorotate dehydrogenase (quinone), mitochondrial. | Dihydropyrimidine dehydrogenase [NADP(+)]. | 0.412 |
Dhodh | Fdxr | MGP_PahariEiJ_P0054224 | MGP_PahariEiJ_P0037597 | Dihydroorotate dehydrogenase (quinone), mitochondrial. | NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1. | 0.742 |
Dpyd | Cyb5r4 | MGP_PahariEiJ_P0071129 | MGP_PahariEiJ_P0024622 | Dihydropyrimidine dehydrogenase [NADP(+)]. | Cytochrome b5 reductase 4 isoform X1. | 0.889 |
Dpyd | Dhodh | MGP_PahariEiJ_P0071129 | MGP_PahariEiJ_P0054224 | Dihydropyrimidine dehydrogenase [NADP(+)]. | Dihydroorotate dehydrogenase (quinone), mitochondrial. | 0.412 |
Dpyd | Fdxr | MGP_PahariEiJ_P0071129 | MGP_PahariEiJ_P0037597 | Dihydropyrimidine dehydrogenase [NADP(+)]. | NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1. | 0.742 |
Etfb | Fdxr | MGP_PahariEiJ_P0016026 | MGP_PahariEiJ_P0037597 | Electron transfer flavoprotein beta subunit. | NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1. | 0.750 |
Fdx1 | Cyb5r4 | MGP_PahariEiJ_P0023505 | MGP_PahariEiJ_P0024622 | Ferredoxin-1, mitochondrial. | Cytochrome b5 reductase 4 isoform X1. | 0.640 |
Fdx1 | Fdx2 | MGP_PahariEiJ_P0023505 | MGP_PahariEiJ_P0022570 | Ferredoxin-1, mitochondrial. | Ferredoxin 2. | 0.702 |
Fdx1 | Fdxr | MGP_PahariEiJ_P0023505 | MGP_PahariEiJ_P0037597 | Ferredoxin-1, mitochondrial. | NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1. | 0.970 |
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