Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fhod3 | Strn3 | MGP_PahariEiJ_P0038798 | MGP_PahariEiJ_P0082358 | FH1/FH2 domain-containing protein 3 isoform X1. | Striatin-3 isoform X1. | 0.538 |
Fhod3 | Syne1 | MGP_PahariEiJ_P0038798 | MGP_PahariEiJ_P0056223 | FH1/FH2 domain-containing protein 3 isoform X1. | Nesprin-1-like. | 0.589 |
Fhod3 | Syne2 | MGP_PahariEiJ_P0038798 | MGP_PahariEiJ_P0082673 | FH1/FH2 domain-containing protein 3 isoform X1. | Nesprin-2. | 0.635 |
Fhod3 | Ttc22 | MGP_PahariEiJ_P0038798 | MGP_PahariEiJ_P0078390 | FH1/FH2 domain-containing protein 3 isoform X1. | Tetratricopeptide repeat protein 22. | 0.420 |
Strn3 | Fhod3 | MGP_PahariEiJ_P0082358 | MGP_PahariEiJ_P0038798 | Striatin-3 isoform X1. | FH1/FH2 domain-containing protein 3 isoform X1. | 0.538 |
Syne1 | Fhod3 | MGP_PahariEiJ_P0056223 | MGP_PahariEiJ_P0038798 | Nesprin-1-like. | FH1/FH2 domain-containing protein 3 isoform X1. | 0.589 |
Syne1 | Syne2 | MGP_PahariEiJ_P0056223 | MGP_PahariEiJ_P0082673 | Nesprin-1-like. | Nesprin-2. | 0.889 |
Syne2 | Fhod3 | MGP_PahariEiJ_P0082673 | MGP_PahariEiJ_P0038798 | Nesprin-2. | FH1/FH2 domain-containing protein 3 isoform X1. | 0.635 |
Syne2 | Syne1 | MGP_PahariEiJ_P0082673 | MGP_PahariEiJ_P0056223 | Nesprin-2. | Nesprin-1-like. | 0.889 |
Ttc22 | Fhod3 | MGP_PahariEiJ_P0078390 | MGP_PahariEiJ_P0038798 | Tetratricopeptide repeat protein 22. | FH1/FH2 domain-containing protein 3 isoform X1. | 0.420 |