STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
1700034E13RikZinc finger protein 474. (109 aa)    
Predicted Functional Partners:
2510009E07Rik
UPF0524 protein C3orf70 homolog.
      
 0.663
Rrp7a
Ribosomal RNA-processing protein 7 homolog A.
      
 0.662
Efr3b
Protein EFR3 homolog B isoform X1.
      
 0.505
Yif1b
Protein transport protein YIF1.
      
 0.502
Trim67
Tripartite motif-containing protein 67 isoform X1.
   
  
 0.499
Galnt5
Polypeptide N-acetylgalactosaminyltransferase 5.
      
 0.497
Cfap161
Cilia- and flagella-associated protein 161 isoform X1.
   
    0.465
Tmem177
Transmembrane protein 177.
   
    0.453
Slc25a51
Solute carrier family 25 member 51.
      
 0.446
Ssh2
Protein phosphatase Slingshot homolog 2 isoform X1.
   
  
 0.430
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.