STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cxxc1CXXC-type zinc finger protein 1 isoform X1. (659 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.997
Ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2.
   
 0.995
Dpy30
Protein dpy-30 homolog isoform X1.
    
 0.979
Setd1b
[histone H3]-lysine4 N-trimethyltransferase SETD1.
   
 0.974
Wdr5
WD repeat-containing protein 5.
   
 0.969
Setd1a
[histone H3]-lysine4 N-trimethyltransferase SETD1.
   
 0.955
Hcfc1
Host cell factor 1 isoform X1.
   
 0.877
Hcfc2
Host cell factor C2.
   
 0.873
Wdr5b
WD repeat-containing protein 5B.
   
 0.834
Bod1l
Biorientation of chromosomes in cell division protein 1-like 1 isoform X1.
   
 0.819
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.