Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC110333018 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0020720 | Large subunit ribosomal protein L17e. | annotation not available | 0.997 |
LOC110333018 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0020721 | Large subunit ribosomal protein L17e. | annotation not available | 0.997 |
LOC110333018 | Rpl14 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0026279 | Large subunit ribosomal protein L17e. | Large subunit ribosomal protein L14e. | 0.997 |
LOC110333018 | Rpl18 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0016463 | Large subunit ribosomal protein L17e. | 60S ribosomal protein L18 isoform X1. | 0.997 |
LOC110333018 | Rpl23 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0036295 | Large subunit ribosomal protein L17e. | Large subunit ribosomal protein L23e. | 0.997 |
LOC110333018 | Rpl23a | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0035262 | Large subunit ribosomal protein L17e. | Large subunit ribosomal protein L23Ae. | 0.997 |
LOC110333018 | Rpl26 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0034170 | Large subunit ribosomal protein L17e. | Large subunit ribosomal protein L26e. | 0.997 |
LOC110333018 | Rpl4 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0023943 | Large subunit ribosomal protein L17e. | Large subunit ribosomal protein L4e. | 0.997 |
LOC110333018 | Rpl5 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0032708 | Large subunit ribosomal protein L17e. | Large subunit ribosomal protein L5e. | 0.997 |
LOC110333018 | Rpl8 | MGP_PahariEiJ_P0039707 | MGP_PahariEiJ_P0042135 | Large subunit ribosomal protein L17e. | Large subunit ribosomal protein L8e. | 0.997 |
MGP_PahariEiJ_P0020720 | LOC110333018 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0039707 | annotation not available | Large subunit ribosomal protein L17e. | 0.997 |
MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0020721 | annotation not available | annotation not available | 0.984 |
MGP_PahariEiJ_P0020720 | Rpl14 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0026279 | annotation not available | Large subunit ribosomal protein L14e. | 0.999 |
MGP_PahariEiJ_P0020720 | Rpl18 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0016463 | annotation not available | 60S ribosomal protein L18 isoform X1. | 0.999 |
MGP_PahariEiJ_P0020720 | Rpl23 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0036295 | annotation not available | Large subunit ribosomal protein L23e. | 0.998 |
MGP_PahariEiJ_P0020720 | Rpl23a | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0035262 | annotation not available | Large subunit ribosomal protein L23Ae. | 0.999 |
MGP_PahariEiJ_P0020720 | Rpl26 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0034170 | annotation not available | Large subunit ribosomal protein L26e. | 0.998 |
MGP_PahariEiJ_P0020720 | Rpl4 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0023943 | annotation not available | Large subunit ribosomal protein L4e. | 0.999 |
MGP_PahariEiJ_P0020720 | Rpl5 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0032708 | annotation not available | Large subunit ribosomal protein L5e. | 0.998 |
MGP_PahariEiJ_P0020720 | Rpl8 | MGP_PahariEiJ_P0020720 | MGP_PahariEiJ_P0042135 | annotation not available | Large subunit ribosomal protein L8e. | 0.998 |
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