STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13a1Coagulation factor XIII A1 polypeptide. (732 aa)    
Predicted Functional Partners:
F2
Coagulation factor II (thrombin).
     
 0.990
F13b
Coagulation factor XIII B polypeptide.
    
 0.941
Aplnr
Apelin receptor.
      
 0.643
Apln
Apelin.
      
 0.620
Vwf
Von Willebrand factor.
   
  
 0.614
Fga
Fibrinogen alpha chain isoform X1.
    
 0.540
Serpinc1
Antithrombin III.
     
 0.518
Cd163
Scavenger receptor cysteine-rich type 1 protein M130 isoform X1.
   
 
 0.488
Proc
Vitamin K-dependent protein C isoform X1.
     
 0.474
Serpine2
Glia-derived nexin isoform X1.
     
 0.465
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.