Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Agt | Bdkrb1 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0083383 | Angiotensinogen. | B1 bradykinin receptor. | 0.966 |
Agt | Bdkrb2 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0083382 | Angiotensinogen. | B2 bradykinin receptor isoform X1. | 0.978 |
Agt | Ece1 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0080427 | Angiotensinogen. | Endothelin-converting enzyme 1 isoform X1. | 0.651 |
Agt | Edn1 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0040786 | Angiotensinogen. | Endothelin-1. | 0.837 |
Agt | Edn2 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0079243 | Angiotensinogen. | Endothelin-2. | 0.409 |
Agt | Edn3 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0067525 | Angiotensinogen. | Endothelin-3. | 0.498 |
Agt | Ednra | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0053369 | Angiotensinogen. | Endothelin-1 receptor isoform X1. | 0.983 |
Agt | Ednrb | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0085670 | Angiotensinogen. | Endothelin receptor type B. | 0.975 |
Agt | Mmp2 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0053769 | Angiotensinogen. | Matrix metalloproteinase-2 (gelatinase A). | 0.620 |
Agt | Mmp9 | MGP_PahariEiJ_P0054761 | MGP_PahariEiJ_P0067125 | Angiotensinogen. | Matrix metalloproteinase-9 (gelatinase B). | 0.661 |
Bdkrb1 | Agt | MGP_PahariEiJ_P0083383 | MGP_PahariEiJ_P0054761 | B1 bradykinin receptor. | Angiotensinogen. | 0.966 |
Bdkrb1 | Bdkrb2 | MGP_PahariEiJ_P0083383 | MGP_PahariEiJ_P0083382 | B1 bradykinin receptor. | B2 bradykinin receptor isoform X1. | 0.969 |
Bdkrb1 | Edn1 | MGP_PahariEiJ_P0083383 | MGP_PahariEiJ_P0040786 | B1 bradykinin receptor. | Endothelin-1. | 0.954 |
Bdkrb1 | Edn3 | MGP_PahariEiJ_P0083383 | MGP_PahariEiJ_P0067525 | B1 bradykinin receptor. | Endothelin-3. | 0.502 |
Bdkrb2 | Agt | MGP_PahariEiJ_P0083382 | MGP_PahariEiJ_P0054761 | B2 bradykinin receptor isoform X1. | Angiotensinogen. | 0.978 |
Bdkrb2 | Bdkrb1 | MGP_PahariEiJ_P0083382 | MGP_PahariEiJ_P0083383 | B2 bradykinin receptor isoform X1. | B1 bradykinin receptor. | 0.969 |
Bdkrb2 | Edn1 | MGP_PahariEiJ_P0083382 | MGP_PahariEiJ_P0040786 | B2 bradykinin receptor isoform X1. | Endothelin-1. | 0.952 |
Bdkrb2 | Edn3 | MGP_PahariEiJ_P0083382 | MGP_PahariEiJ_P0067525 | B2 bradykinin receptor isoform X1. | Endothelin-3. | 0.451 |
Bdkrb2 | Ednra | MGP_PahariEiJ_P0083382 | MGP_PahariEiJ_P0053369 | B2 bradykinin receptor isoform X1. | Endothelin-1 receptor isoform X1. | 0.540 |
Bdkrb2 | Ednrb | MGP_PahariEiJ_P0083382 | MGP_PahariEiJ_P0085670 | B2 bradykinin receptor isoform X1. | Endothelin receptor type B. | 0.476 |
page 1 of 4