Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dvl1 | Nxnl2 | MGP_PahariEiJ_P0081477 | MGP_PahariEiJ_P0040943 | Segment polarity protein dishevelled homolog DVL-1 isoform X1. | Nucleoredoxin-like protein 2. | 0.764 |
Nxnl2 | Dvl1 | MGP_PahariEiJ_P0040943 | MGP_PahariEiJ_P0081477 | Nucleoredoxin-like protein 2. | Segment polarity protein dishevelled homolog DVL-1 isoform X1. | 0.764 |
Nxnl2 | Reep6 | MGP_PahariEiJ_P0040943 | MGP_PahariEiJ_P0087075 | Nucleoredoxin-like protein 2. | Receptor expression-enhancing protein 5/6. | 0.414 |
Nxnl2 | Txnl1 | MGP_PahariEiJ_P0040943 | MGP_PahariEiJ_P0039495 | Nucleoredoxin-like protein 2. | Thioredoxin-like protein 1. | 0.420 |
Nxnl2 | Txnl4a | MGP_PahariEiJ_P0040943 | MGP_PahariEiJ_P0039783 | Nucleoredoxin-like protein 2. | Thioredoxin-like protein 4A isoform X1. | 0.512 |
Nxnl2 | Txnl4b | MGP_PahariEiJ_P0040943 | MGP_PahariEiJ_P0054219 | Nucleoredoxin-like protein 2. | Thioredoxin-like protein 4B. | 0.504 |
Reep6 | Nxnl2 | MGP_PahariEiJ_P0087075 | MGP_PahariEiJ_P0040943 | Receptor expression-enhancing protein 5/6. | Nucleoredoxin-like protein 2. | 0.414 |
Txnl1 | Nxnl2 | MGP_PahariEiJ_P0039495 | MGP_PahariEiJ_P0040943 | Thioredoxin-like protein 1. | Nucleoredoxin-like protein 2. | 0.420 |
Txnl1 | Txnl4a | MGP_PahariEiJ_P0039495 | MGP_PahariEiJ_P0039783 | Thioredoxin-like protein 1. | Thioredoxin-like protein 4A isoform X1. | 0.420 |
Txnl4a | Nxnl2 | MGP_PahariEiJ_P0039783 | MGP_PahariEiJ_P0040943 | Thioredoxin-like protein 4A isoform X1. | Nucleoredoxin-like protein 2. | 0.512 |
Txnl4a | Txnl1 | MGP_PahariEiJ_P0039783 | MGP_PahariEiJ_P0039495 | Thioredoxin-like protein 4A isoform X1. | Thioredoxin-like protein 1. | 0.420 |
Txnl4a | Txnl4b | MGP_PahariEiJ_P0039783 | MGP_PahariEiJ_P0054219 | Thioredoxin-like protein 4A isoform X1. | Thioredoxin-like protein 4B. | 0.667 |
Txnl4b | Nxnl2 | MGP_PahariEiJ_P0054219 | MGP_PahariEiJ_P0040943 | Thioredoxin-like protein 4B. | Nucleoredoxin-like protein 2. | 0.504 |
Txnl4b | Txnl4a | MGP_PahariEiJ_P0054219 | MGP_PahariEiJ_P0039783 | Thioredoxin-like protein 4B. | Thioredoxin-like protein 4A isoform X1. | 0.667 |