STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Simc1LOW QUALITY PROTEIN: SUMO-interacting motif-containing protein 1. (453 aa)    
Predicted Functional Partners:
Slf2
SMC5-SMC6 complex localization factor protein 2.
    
   0.697
Unc79
Protein unc-79 homolog isoform X1.
    
 0.686
Mc2r
Adrenocorticotropic hormone receptor.
     
 0.506
Ranbp2
E3 SUMO-protein ligase RanBP2.
    
 0.482
Kdm6b
Lysine-specific demethylase 6B.
    
 0.449
Kdm6a
Lysine-specific demethylase 6A isoform X1.
    
 0.449
Rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.438
Ash2l
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.432
Rab24
Ras-related protein Rab-24.
   
 0.408
Tep1
Telomerase protein component 1.
   
 0.405
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.