Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arntl | Clock | MGP_PahariEiJ_P0018432 | MGP_PahariEiJ_P0031894 | Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. | Circadian locomoter output cycles kaput protein. | 0.999 |
Arntl | Cry1 | MGP_PahariEiJ_P0018432 | MGP_PahariEiJ_P0088341 | Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. | Cryptochrome-1 isoform X1. | 0.999 |
Arntl | Cry2 | MGP_PahariEiJ_P0018432 | MGP_PahariEiJ_P0064187 | Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. | Cryptochrome-2. | 0.999 |
Arntl | Fbxl21 | MGP_PahariEiJ_P0018432 | MGP_PahariEiJ_P0041180 | Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. | F-box and leucine-rich repeat protein 21. | 0.554 |
Arntl | Per2 | MGP_PahariEiJ_P0018432 | MGP_PahariEiJ_P0074395 | Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. | Period circadian protein homolog 2 isoform X1. | 0.999 |
Clock | Arntl | MGP_PahariEiJ_P0031894 | MGP_PahariEiJ_P0018432 | Circadian locomoter output cycles kaput protein. | Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. | 0.999 |
Clock | Cry1 | MGP_PahariEiJ_P0031894 | MGP_PahariEiJ_P0088341 | Circadian locomoter output cycles kaput protein. | Cryptochrome-1 isoform X1. | 0.999 |
Clock | Cry2 | MGP_PahariEiJ_P0031894 | MGP_PahariEiJ_P0064187 | Circadian locomoter output cycles kaput protein. | Cryptochrome-2. | 0.999 |
Clock | Fbxl21 | MGP_PahariEiJ_P0031894 | MGP_PahariEiJ_P0041180 | Circadian locomoter output cycles kaput protein. | F-box and leucine-rich repeat protein 21. | 0.565 |
Clock | Per2 | MGP_PahariEiJ_P0031894 | MGP_PahariEiJ_P0074395 | Circadian locomoter output cycles kaput protein. | Period circadian protein homolog 2 isoform X1. | 0.999 |
Commd4 | Cul1 | MGP_PahariEiJ_P0023677 | MGP_PahariEiJ_P0049695 | COMM domain-containing protein 4. | Cullin 1. | 0.609 |
Commd4 | Fbxl21 | MGP_PahariEiJ_P0023677 | MGP_PahariEiJ_P0041180 | COMM domain-containing protein 4. | F-box and leucine-rich repeat protein 21. | 0.525 |
Commd4 | Nedd8 | MGP_PahariEiJ_P0023677 | MGP_PahariEiJ_P0084997 | COMM domain-containing protein 4. | Ubiquitin-like protein Nedd8. | 0.615 |
Commd4 | Skp1a | MGP_PahariEiJ_P0023677 | MGP_PahariEiJ_P0033356 | COMM domain-containing protein 4. | S-phase kinase-associated protein 1. | 0.560 |
Cry1 | Arntl | MGP_PahariEiJ_P0088341 | MGP_PahariEiJ_P0018432 | Cryptochrome-1 isoform X1. | Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1. | 0.999 |
Cry1 | Clock | MGP_PahariEiJ_P0088341 | MGP_PahariEiJ_P0031894 | Cryptochrome-1 isoform X1. | Circadian locomoter output cycles kaput protein. | 0.999 |
Cry1 | Cry2 | MGP_PahariEiJ_P0088341 | MGP_PahariEiJ_P0064187 | Cryptochrome-1 isoform X1. | Cryptochrome-2. | 0.999 |
Cry1 | Fbxl21 | MGP_PahariEiJ_P0088341 | MGP_PahariEiJ_P0041180 | Cryptochrome-1 isoform X1. | F-box and leucine-rich repeat protein 21. | 0.825 |
Cry1 | Per2 | MGP_PahariEiJ_P0088341 | MGP_PahariEiJ_P0074395 | Cryptochrome-1 isoform X1. | Period circadian protein homolog 2 isoform X1. | 0.999 |
Cry1 | Skp1a | MGP_PahariEiJ_P0088341 | MGP_PahariEiJ_P0033356 | Cryptochrome-1 isoform X1. | S-phase kinase-associated protein 1. | 0.679 |
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