STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dapk1Death-associated protein kinase 1 isoform X1. (1430 aa)    
Predicted Functional Partners:
Becn1
Beclin-1 isoform X1.
   
 0.965
Mapk3
Mitogen-activated protein kinase 3 isoform X1.
    
0.925
Mapk1
Mitogen-activated protein kinase 1 isoform X1.
    
0.925
Dapk2
Death-associated protein kinase 2 isoform X1.
     
0.905
Dapk3
Death-associated protein kinase 3 isoform X1.
     
0.905
Grin2b
Glutamate receptor ionotropic, NMDA 2B.
   
 0.732
Klhl20
Kelch-like protein 20 isoform X1.
    
 
 0.729
Unc5b
Netrin receptor UNC5B isoform X1.
    
 0.712
Trp53
Cellular tumor antigen p53 isoform X1.
   
 
 0.709
LOC110334182
Calmodulin-4.
   
 0.675
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.