STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tigd5Tigger transposable element-derived protein 5. (642 aa)    
Predicted Functional Partners:
Zc3h3
Zinc finger CCCH domain-containing protein 3.
      
 0.642
Ube2i
Ubiquitin-conjugating enzyme E2 I.
    
  0.610
Eef1d
Elongation factor 1-delta isoform X1.
      
 0.505
Gsdmc
Gasdermin-C.
      
 0.504
Tigd4
Tigger transposable element-derived protein 4.
  
   
0.429
Kctd2
BTB/POZ domain-containing protein KCTD2/5/17.
    
  0.428
Tcap
Telethonin.
      
 0.420
Grb7
Growth factor receptor-bound protein 7.
      
 0.418
Setmar
Histone-lysine N-methyltransferase SETMAR isoform X1.
   
 
 0.418
MGP_PahariEiJ_P0076252
annotation not available
      
 0.418
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.