STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbx6Chromobox protein homolog 6 isoform X1. (414 aa)    
Predicted Functional Partners:
Ring1
E3 ubiquitin-protein ligase RNF1/2.
    
 0.958
Rnf2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.955
Bmi1
Polycomb group RING finger protein 4.
    
 0.946
Cbx8
Chromobox protein homolog 8.
    
0.942
Pcgf2
Polycomb group RING finger protein 2.
    
 0.941
Pcgf1
Polycomb group RING finger protein 1.
    
 0.926
Pcgf6
Polycomb group RING finger protein 6 isoform X1.
    
 0.916
Pcgf3
Polycomb group RING finger protein 3.
    
 0.906
Phc2
Polyhomeotic-like protein 2 isoform X1.
    
 0.898
Scml2
Sex comb on midleg-like protein 2.
    
 0.893
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.