Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ash2l | Rbbp5 | MGP_PahariEiJ_P0046971 | MGP_PahariEiJ_P0075119 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Retinoblastoma-binding protein 5 isoform X1. | 0.999 |
Ash2l | Suz12 | MGP_PahariEiJ_P0046971 | MGP_PahariEiJ_P0035393 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Polycomb protein SUZ12 isoform X1. | 0.569 |
Ash2l | Tcf20 | MGP_PahariEiJ_P0046971 | MGP_PahariEiJ_P0042569 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Transcription factor 20 isoform X1. | 0.605 |
Brd1 | Tcf20 | MGP_PahariEiJ_P0042725 | MGP_PahariEiJ_P0042569 | Bromodomain-containing protein 1 isoform X1. | Transcription factor 20 isoform X1. | 0.529 |
Cdyl | Cdyl2 | MGP_PahariEiJ_P0040709 | MGP_PahariEiJ_P0054391 | Chromodomain Y-like protein isoform X1. | Chromodomain Y-like protein 2. | 0.565 |
Cdyl | Eed | MGP_PahariEiJ_P0040709 | MGP_PahariEiJ_P0017469 | Chromodomain Y-like protein isoform X1. | Polycomb protein EED isoform X1. | 0.861 |
Cdyl | Suz12 | MGP_PahariEiJ_P0040709 | MGP_PahariEiJ_P0035393 | Chromodomain Y-like protein isoform X1. | Polycomb protein SUZ12 isoform X1. | 0.878 |
Cdyl | Tcf20 | MGP_PahariEiJ_P0040709 | MGP_PahariEiJ_P0042569 | Chromodomain Y-like protein isoform X1. | Transcription factor 20 isoform X1. | 0.516 |
Cdyl2 | Cdyl | MGP_PahariEiJ_P0054391 | MGP_PahariEiJ_P0040709 | Chromodomain Y-like protein 2. | Chromodomain Y-like protein isoform X1. | 0.565 |
Cdyl2 | Eed | MGP_PahariEiJ_P0054391 | MGP_PahariEiJ_P0017469 | Chromodomain Y-like protein 2. | Polycomb protein EED isoform X1. | 0.861 |
Cdyl2 | Suz12 | MGP_PahariEiJ_P0054391 | MGP_PahariEiJ_P0035393 | Chromodomain Y-like protein 2. | Polycomb protein SUZ12 isoform X1. | 0.878 |
Cdyl2 | Tcf20 | MGP_PahariEiJ_P0054391 | MGP_PahariEiJ_P0042569 | Chromodomain Y-like protein 2. | Transcription factor 20 isoform X1. | 0.516 |
Eed | Cdyl | MGP_PahariEiJ_P0017469 | MGP_PahariEiJ_P0040709 | Polycomb protein EED isoform X1. | Chromodomain Y-like protein isoform X1. | 0.861 |
Eed | Cdyl2 | MGP_PahariEiJ_P0017469 | MGP_PahariEiJ_P0054391 | Polycomb protein EED isoform X1. | Chromodomain Y-like protein 2. | 0.861 |
Eed | Mphosph8 | MGP_PahariEiJ_P0017469 | MGP_PahariEiJ_P0085043 | Polycomb protein EED isoform X1. | M-phase phosphoprotein 8. | 0.491 |
Eed | Suz12 | MGP_PahariEiJ_P0017469 | MGP_PahariEiJ_P0035393 | Polycomb protein EED isoform X1. | Polycomb protein SUZ12 isoform X1. | 0.999 |
Eed | Tcf20 | MGP_PahariEiJ_P0017469 | MGP_PahariEiJ_P0042569 | Polycomb protein EED isoform X1. | Transcription factor 20 isoform X1. | 0.576 |
Mphosph8 | Eed | MGP_PahariEiJ_P0085043 | MGP_PahariEiJ_P0017469 | M-phase phosphoprotein 8. | Polycomb protein EED isoform X1. | 0.491 |
Mphosph8 | Suz12 | MGP_PahariEiJ_P0085043 | MGP_PahariEiJ_P0035393 | M-phase phosphoprotein 8. | Polycomb protein SUZ12 isoform X1. | 0.475 |
Mphosph8 | Tcf20 | MGP_PahariEiJ_P0085043 | MGP_PahariEiJ_P0042569 | M-phase phosphoprotein 8. | Transcription factor 20 isoform X1. | 0.572 |
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