STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smc1bStructural maintenance of chromosomes protein 1B. (1248 aa)    
Predicted Functional Partners:
Smc3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
0.998
Stag1
Cohesin complex subunit SA-1/2.
   
 0.996
Rad21
Double-strand-break repair protein rad21 homolog.
   
 0.996
Stag3
Cohesin complex subunit SA-3.
   
 0.996
Stag2
Cohesin complex subunit SA-1/2.
   
 0.994
Rad21l
Double-strand-break repair protein rad21-like protein 1.
   
 0.993
Rec8
Meiotic recombination protein REC8, animal type.
   
 0.993
Smc1a
Structural maintenance of chromosomes protein 1A.
  
 
0.990
Espl1
Separase.
   
 0.977
Pds5b
Sister chromatid cohesion protein PDS5 homolog B.
   
 0.928
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.