Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arsa | Arsb | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0026799 | Arylsulfatase A. | Arylsulfatase B isoform X1. | 0.954 |
Arsa | Arsg | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0037430 | Arylsulfatase A. | Arylsulfatase G. | 0.947 |
Arsa | Galc | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0083170 | Arylsulfatase A. | Galactocerebrosidase isoform X1. | 0.953 |
Arsa | Gla | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0090292 | Arylsulfatase A. | Alpha-galactosidase A. | 0.928 |
Arsa | Med14 | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0088672 | Arylsulfatase A. | Mediator of RNA polymerase II transcription subunit 14. | 0.875 |
Arsa | Neu1 | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0043898 | Arylsulfatase A. | Sialidase-1. | 0.912 |
Arsa | Neu2 | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0074216 | Arylsulfatase A. | Sialidase-2 isoform X1. | 0.928 |
Arsa | Neu3 | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0017699 | Arylsulfatase A. | Sialidase-2/3/4. | 0.930 |
Arsa | Neu4 | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0074589 | Arylsulfatase A. | Sialidase-2/3/4. | 0.914 |
Arsa | Ugt8a | MGP_PahariEiJ_P0042845 | MGP_PahariEiJ_P0071288 | Arylsulfatase A. | 2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform X1. | 0.939 |
Arsb | Arsa | MGP_PahariEiJ_P0026799 | MGP_PahariEiJ_P0042845 | Arylsulfatase B isoform X1. | Arylsulfatase A. | 0.954 |
Arsb | Arsg | MGP_PahariEiJ_P0026799 | MGP_PahariEiJ_P0037430 | Arylsulfatase B isoform X1. | Arylsulfatase G. | 0.954 |
Arsb | Med14 | MGP_PahariEiJ_P0026799 | MGP_PahariEiJ_P0088672 | Arylsulfatase B isoform X1. | Mediator of RNA polymerase II transcription subunit 14. | 0.673 |
Arsg | Arsa | MGP_PahariEiJ_P0037430 | MGP_PahariEiJ_P0042845 | Arylsulfatase G. | Arylsulfatase A. | 0.947 |
Arsg | Arsb | MGP_PahariEiJ_P0037430 | MGP_PahariEiJ_P0026799 | Arylsulfatase G. | Arylsulfatase B isoform X1. | 0.954 |
Arsg | Med14 | MGP_PahariEiJ_P0037430 | MGP_PahariEiJ_P0088672 | Arylsulfatase G. | Mediator of RNA polymerase II transcription subunit 14. | 0.875 |
Galc | Arsa | MGP_PahariEiJ_P0083170 | MGP_PahariEiJ_P0042845 | Galactocerebrosidase isoform X1. | Arylsulfatase A. | 0.953 |
Galc | Gla | MGP_PahariEiJ_P0083170 | MGP_PahariEiJ_P0090292 | Galactocerebrosidase isoform X1. | Alpha-galactosidase A. | 0.934 |
Galc | Neu1 | MGP_PahariEiJ_P0083170 | MGP_PahariEiJ_P0043898 | Galactocerebrosidase isoform X1. | Sialidase-1. | 0.908 |
Galc | Neu2 | MGP_PahariEiJ_P0083170 | MGP_PahariEiJ_P0074216 | Galactocerebrosidase isoform X1. | Sialidase-2 isoform X1. | 0.908 |
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