STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc38a1Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 1. (485 aa)    
Predicted Functional Partners:
Slc38a2
Solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2.
  
  
 
0.901
Slc1a5
Solute carrier family 1 (neutral amino acid transporter), member 5.
    
 
 0.734
Slc1a7
Solute carrier family 1 (glutamate transporter), member 7.
    
 
 0.643
Slc7a5
Solute carrier family 7 (L-type amino acid transporter), member 5.
   
 
 0.631
Aanat
Arylalkylamine N-acetyltransferase.
    
 
 0.574
Slc7a8
Solute carrier family 7 (L-type amino acid transporter), member 8.
   
 
 0.572
Slc3a2
4F2 cell-surface antigen heavy chain.
   
  
 0.562
Lamtor2
Ragulator complex protein LAMTOR2 isoform X1.
    
 0.541
Slc7a6
Solute carrier family 7 (L-type amino acid transporter), member 6.
   
 
 0.511
Glul
Glutamine synthetase.
   
  
 0.511
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.