STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccnt1Cyclin-T1 isoform X1. (726 aa)    
Predicted Functional Partners:
Cdk9
Cyclin-dependent kinase 9.
   
 0.999
Aff4
AF4/FMR2 family member 4 isoform X1.
   
 0.993
Brd4
Bromodomain-containing protein 4 isoform X1.
   
 0.985
Ccnt2
Cyclin-T2 isoform X1.
    
0.984
Aff1
AF4/FMR2 family member 1.
   
 0.968
Ell2
RNA polymerase II elongation factor ELL2.
    
 0.949
Cdk13
Cyclin-dependent kinase 13 isoform X1.
   
 0.949
Ell
RNA polymerase II elongation factor ELL.
    
 0.949
Mllt1
YEATS domain-containing protein 1/3.
   
 0.948
Ell3
RNA polymerase II elongation factor ELL3.
    
 0.943
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.