STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxc9Homeobox protein HoxB/C/D9. (260 aa)    
Predicted Functional Partners:
Hoxc6
Homeobox protein Hox-C6 isoform X1.
   
 
0.936
Hoxc10
Homeobox protein Hox-C10.
   
 
0.809
Pbx2
Pre-B-cell leukemia transcription factor 2 isoform X1.
    
 
 0.685
Pbx4
Pre-B-cell leukemia transcription factor 4.
    
 
 0.685
Pbx3
Pre-B-cell leukemia transcription factor 3 isoform X1.
    
 
 0.685
Pbx1
Pre-B-cell leukemia transcription factor 1 isoform X1.
    
 
 0.685
Hoxc4
Homeobox protein HoxA/B/C/D4.
   
 
0.585
Hoxb6
Homeobox protein HoxA/B/C6.
   
 
0.584
Lhx8
LIM/homeobox protein Lhx8.
    
 
 0.570
Tmem26
Transmembrane protein 26.
      
 0.556
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.