STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddr1Epithelial discoidin domain-containing receptor 1 isoform X1. (911 aa)    
Predicted Functional Partners:
Tm4sf1
Transmembrane 4 L6 family member 1.
      
 0.580
Cdh1
Cadherin 1, type 1, E-cadherin.
    
 
 0.528
Itga2
Integrin alpha 2.
      
 0.501
Prkca
Protein kinase C alpha type isoform X1.
      
0.497
Gp6
Platelet glycoprotein VI isoform X1.
      
 0.418
Col1a1
Collagen alpha-1(I) chain.
   
 
 0.417
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.