Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd4 | H2-Ab1 | MGP_PahariEiJ_P0052367 | MGP_PahariEiJ_P0043731 | T-cell surface glycoprotein CD4 isoform X1. | H-2 class II histocompatibility antigen, A-S beta chain. | 0.951 |
Cd4 | Ifng | MGP_PahariEiJ_P0052367 | MGP_PahariEiJ_P0087814 | T-cell surface glycoprotein CD4 isoform X1. | Interferon gamma. | 0.768 |
Cd4 | Il17a | MGP_PahariEiJ_P0052367 | MGP_PahariEiJ_P0072224 | T-cell surface glycoprotein CD4 isoform X1. | Interleukin 17A. | 0.770 |
Cd4 | Mbp | MGP_PahariEiJ_P0052367 | MGP_PahariEiJ_P0039817 | T-cell surface glycoprotein CD4 isoform X1. | Myelin basic protein isoform X1. | 0.664 |
Cd4 | Mog | MGP_PahariEiJ_P0052367 | MGP_PahariEiJ_P0044264 | T-cell surface glycoprotein CD4 isoform X1. | Myelin-oligodendrocyte glycoprotein isoform X1. | 0.754 |
Cnp | Mbp | MGP_PahariEiJ_P0036606 | MGP_PahariEiJ_P0039817 | 2',3'-cyclic-nucleotide 3'-phosphodiesterase. | Myelin basic protein isoform X1. | 0.778 |
Cnp | Mobp | MGP_PahariEiJ_P0036606 | MGP_PahariEiJ_P0026268 | 2',3'-cyclic-nucleotide 3'-phosphodiesterase. | Myelin-associated oligodendrocyte basic protein isoform X1. | 0.640 |
Cnp | Mog | MGP_PahariEiJ_P0036606 | MGP_PahariEiJ_P0044264 | 2',3'-cyclic-nucleotide 3'-phosphodiesterase. | Myelin-oligodendrocyte glycoprotein isoform X1. | 0.722 |
Cnp | Plp1 | MGP_PahariEiJ_P0036606 | MGP_PahariEiJ_P0090380 | 2',3'-cyclic-nucleotide 3'-phosphodiesterase. | Proteolipid protein (myelin) 1. | 0.697 |
H2-Ab1 | Cd4 | MGP_PahariEiJ_P0043731 | MGP_PahariEiJ_P0052367 | H-2 class II histocompatibility antigen, A-S beta chain. | T-cell surface glycoprotein CD4 isoform X1. | 0.951 |
H2-Ab1 | Ifng | MGP_PahariEiJ_P0043731 | MGP_PahariEiJ_P0087814 | H-2 class II histocompatibility antigen, A-S beta chain. | Interferon gamma. | 0.588 |
H2-Ab1 | Il17a | MGP_PahariEiJ_P0043731 | MGP_PahariEiJ_P0072224 | H-2 class II histocompatibility antigen, A-S beta chain. | Interleukin 17A. | 0.441 |
H2-Ab1 | Mbp | MGP_PahariEiJ_P0043731 | MGP_PahariEiJ_P0039817 | H-2 class II histocompatibility antigen, A-S beta chain. | Myelin basic protein isoform X1. | 0.431 |
H2-Ab1 | Mog | MGP_PahariEiJ_P0043731 | MGP_PahariEiJ_P0044264 | H-2 class II histocompatibility antigen, A-S beta chain. | Myelin-oligodendrocyte glycoprotein isoform X1. | 0.749 |
Ifng | Cd4 | MGP_PahariEiJ_P0087814 | MGP_PahariEiJ_P0052367 | Interferon gamma. | T-cell surface glycoprotein CD4 isoform X1. | 0.768 |
Ifng | H2-Ab1 | MGP_PahariEiJ_P0087814 | MGP_PahariEiJ_P0043731 | Interferon gamma. | H-2 class II histocompatibility antigen, A-S beta chain. | 0.588 |
Ifng | Il17a | MGP_PahariEiJ_P0087814 | MGP_PahariEiJ_P0072224 | Interferon gamma. | Interleukin 17A. | 0.766 |
Ifng | Mbp | MGP_PahariEiJ_P0087814 | MGP_PahariEiJ_P0039817 | Interferon gamma. | Myelin basic protein isoform X1. | 0.574 |
Ifng | Mog | MGP_PahariEiJ_P0087814 | MGP_PahariEiJ_P0044264 | Interferon gamma. | Myelin-oligodendrocyte glycoprotein isoform X1. | 0.665 |
Il17a | Cd4 | MGP_PahariEiJ_P0072224 | MGP_PahariEiJ_P0052367 | Interleukin 17A. | T-cell surface glycoprotein CD4 isoform X1. | 0.770 |
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