STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FerTyrosine-protein kinase Fer isoform X1. (453 aa)    
Predicted Functional Partners:
Ctnnb1
Catenin beta-1 isoform X1.
    
 0.953
Ctnnd1-2
Catenin (cadherin-associated protein), delta 1.
    
 0.911
Pak2
Serine/threonine-protein kinase PAK 2 isoform X1.
  
 
0.509
MGP_PahariEiJ_P0044405
annotation not available
    
 0.503
Hsp90aa1
Heat shock protein HSP 90-alpha.
    
 0.503
Sema3a
Semaphorin-3A.
    
 0.501
Itsn2
Intersectin-2.
   
 0.500
Nrp1
Neuropilin-1 isoform X1.
    
 0.489
Hcls1
Hematopoietic lineage cell-specific protein.
   
 0.485
Kit
Mast/stem cell growth factor receptor Kit isoform X1.
   
 
0.483
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.