STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rab12Ras-related protein Rab-12. (290 aa)    
Predicted Functional Partners:
Micall2
MICAL-like protein 2 isoform X1.
    
 0.783
Dennd3
DENN domain-containing protein 3.
    
 0.693
Bicdl2
Coiled-coil domain-containing protein 64.
    
 
 0.686
Pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
    
 
 0.682
Gdi1
Rab GDP dissociation inhibitor alpha isoform X1.
   
 0.675
Micall1
MICAL-like protein 1.
    
 0.660
MGP_PahariEiJ_P0040170
annotation not available
   
 0.653
Tjp1
Tight junction protein ZO-1 isoform X1.
    
 
 0.594
Rab3ip
RAB3A interacting protein.
    
 0.592
Chm
Rab proteins geranylgeranyltransferase component A 1.
    
 0.589
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.