STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abcg5ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1). (652 aa)    
Predicted Functional Partners:
Abcg8
ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2).
  
0.999
Atp2a2
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 isoform X1.
   
 0.781
Atp1a3
Sodium/potassium-transporting ATPase subunit alpha-3 isoform X1.
   
 0.776
Atp1a1
Sodium/potassium-transporting ATPase subunit alpha-1 isoform X1.
   
 0.776
Atp1a4
Sodium/potassium-transporting ATPase subunit alpha-4.
   
 0.776
Atp1a2
Sodium/potassium-transporting ATPase subunit alpha-2 isoform X1.
   
 0.776
Abcg4
ATP-binding cassette, subfamily G (WHITE), member 4.
   
0.772
MGP_PahariEiJ_P0032594
annotation not available
   
0.772
Abcg2
ATP-binding cassette sub-family G member 2 isoform X1.
   
0.772
Abcg1
ATP-binding cassette sub-family G member 1 isoform X1.
   
0.772
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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