STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pou2f2POU domain, class 2, transcription factor 2. (583 aa)    
Predicted Functional Partners:
Pou2af1
POU domain class 2-associating factor 1.
    
 
 0.820
Pou2f1
POU domain, class 2, transcription factor 1 isoform X1.
    
 
0.687
Sp1
Transcription factor Sp1 isoform X1.
    
 0.597
Ep300
Histone acetyltransferase p300.
   
 0.550
Tbp
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.539
Snapc4
SnRNA-activating protein complex subunit 4.
    
  0.527
Polr3k
DNA-directed RNA polymerase III subunit RPC10.
     
 0.525
Pou2f3
POU domain, class 2, transcription factor 3.
    
  
0.522
Gtf2b
Transcription initiation factor TFIIB.
    
 0.514
Zfp143
Zinc finger protein 143 isoform X1.
    
 0.512
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.