STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Letm2LETM1 domain-containing protein LETM2, mitochondrial isoform X1. (480 aa)    
Predicted Functional Partners:
Rps9
40S ribosomal protein S9 isoform X1.
    
 
 0.516
Rps11
Small subunit ribosomal protein S11e.
    
   0.512
Rpl23
Large subunit ribosomal protein L23e.
    
   0.512
Rps18
Small subunit ribosomal protein S18e.
    
   0.512
Rhbdd3
Rhomboid domain-containing protein 3 isoform X1.
      
 0.478
Rps7
Small subunit ribosomal protein S7e.
    
 
 0.477
Rpl8
Large subunit ribosomal protein L8e.
    
 
 0.476
Rhog
Rho-related GTP-binding protein RhoG.
    
 0.462
Mrpl22
39S ribosomal protein L22, mitochondrial.
   
 
 0.442
Fam118a
Protein FAM118A.
    
 
 0.435
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.