STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vps37aVacuolar protein sorting-associated protein 37A isoform X1. (397 aa)    
Predicted Functional Partners:
Tsg101
Tumor susceptibility gene 101 protein isoform X1.
   
 0.985
Ubap1
Ubiquitin-associated protein 1 isoform X1.
    
 0.974
Mvb12a
Multivesicular body subunit 12A.
   
 0.961
Mvb12b
Multivesicular body subunit 12B.
   
 0.960
Uevld
Ubiquitin-conjugating enzyme E2 variant 3 isoform X1.
   
 0.940
Vps25
Vacuolar protein-sorting-associated protein 25 isoform X1.
    
 0.923
Chmp2a
Charged multivesicular body protein 2A.
    
 0.915
Vps36
Vacuolar protein-sorting-associated protein 36 isoform X1.
     
 0.890
Chmp3
Charged multivesicular body protein 3.
     
 0.875
Snf8
Vacuolar-sorting protein SNF8 isoform X1.
     
 0.851
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.