Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Clspn | Primpol | MGP_PahariEiJ_P0079518 | MGP_PahariEiJ_P0047280 | Claspin isoform X1. | DNA-directed primase/polymerase protein. | 0.927 |
Clspn | Rpa1 | MGP_PahariEiJ_P0079518 | MGP_PahariEiJ_P0034970 | Claspin isoform X1. | Replication protein A 70 kDa DNA-binding subunit. | 0.961 |
Clspn | Rpa2 | MGP_PahariEiJ_P0079518 | MGP_PahariEiJ_P0079972 | Claspin isoform X1. | Replication protein A 32 kDa subunit. | 0.839 |
Clspn | Rpa3 | MGP_PahariEiJ_P0079518 | MGP_PahariEiJ_P0048691 | Claspin isoform X1. | Replication protein A 14 kDa subunit. | 0.958 |
Clspn | Smarcal1 | MGP_PahariEiJ_P0079518 | MGP_PahariEiJ_P0073516 | Claspin isoform X1. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1. | 0.550 |
Clspn | Timeless | MGP_PahariEiJ_P0079518 | MGP_PahariEiJ_P0087540 | Claspin isoform X1. | Protein timeless homolog isoform X1. | 0.956 |
Clspn | Tipin | MGP_PahariEiJ_P0079518 | MGP_PahariEiJ_P0023949 | Claspin isoform X1. | TIMELESS-interacting protein. | 0.936 |
Primpol | Clspn | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0079518 | DNA-directed primase/polymerase protein. | Claspin isoform X1. | 0.927 |
Primpol | Rfwd3 | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0054316 | DNA-directed primase/polymerase protein. | E3 ubiquitin-protein ligase RFWD3 isoform X1. | 0.908 |
Primpol | Rpa1 | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0034970 | DNA-directed primase/polymerase protein. | Replication protein A 70 kDa DNA-binding subunit. | 0.970 |
Primpol | Rpa2 | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0079972 | DNA-directed primase/polymerase protein. | Replication protein A 32 kDa subunit. | 0.724 |
Primpol | Rpa3 | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0048691 | DNA-directed primase/polymerase protein. | Replication protein A 14 kDa subunit. | 0.915 |
Primpol | Ska1 | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0039687 | DNA-directed primase/polymerase protein. | Spindle and kinetochore-associated protein 1. | 0.592 |
Primpol | Smarcal1 | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0073516 | DNA-directed primase/polymerase protein. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1. | 0.955 |
Primpol | Timeless | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0087540 | DNA-directed primase/polymerase protein. | Protein timeless homolog isoform X1. | 0.924 |
Primpol | Tipin | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0023949 | DNA-directed primase/polymerase protein. | TIMELESS-interacting protein. | 0.924 |
Primpol | Zranb3 | MGP_PahariEiJ_P0047280 | MGP_PahariEiJ_P0074913 | DNA-directed primase/polymerase protein. | DNA annealing helicase and endonuclease ZRANB3. | 0.827 |
Rfwd3 | Primpol | MGP_PahariEiJ_P0054316 | MGP_PahariEiJ_P0047280 | E3 ubiquitin-protein ligase RFWD3 isoform X1. | DNA-directed primase/polymerase protein. | 0.908 |
Rfwd3 | Rpa1 | MGP_PahariEiJ_P0054316 | MGP_PahariEiJ_P0034970 | E3 ubiquitin-protein ligase RFWD3 isoform X1. | Replication protein A 70 kDa DNA-binding subunit. | 0.929 |
Rfwd3 | Rpa2 | MGP_PahariEiJ_P0054316 | MGP_PahariEiJ_P0079972 | E3 ubiquitin-protein ligase RFWD3 isoform X1. | Replication protein A 32 kDa subunit. | 0.726 |
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